Tag Murphy5Specialization for ReducedAminoAcid#
Specialization for ReducedAminoAcid#
Defined in | seqan/reduced_aminoacid.h |
---|---|
Signature |
typedef Murphy5 Tag<Murphy5_>;
|
Detailed Description
This is the 5-character reduction defined by Murphy et al, 2000, https://www.ncbi.nlm.nih.gov/pubmed/10775656
Since it was created from the 20-letter alphabet the clusters in SeqAn are not identical (they contain more symbols). This is the clustering:
'A', // A G P S T X 'B', // B D E N Q Z 'C', // C I J L M U V 'F', // F W Y * 'K', // H K O R