The package contains BioGRID interactions for various organisms in a simple format


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Documentation for package ‘simpIntLists’ version 1.42.0

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simpIntLists-package The package contains BioGRID interactions for various organisms in a simplified format
ArabidopsisBioGRIDInteractionEntrezId BioGRID interactions for thale cress (Arabidopsis thaliana), entrez ids are used as identifiers
ArabidopsisBioGRIDInteractionOfficial BioGRID interactions for thale cress (Arabidopsis thaliana), official names are used as identifiers
ArabidopsisBioGRIDInteractionUniqueId BioGRID interactions for thale cress (Arabidopsis thaliana), unique ids are used as identifiers
C.ElegansBioGRIDInteractionEntrezId BioGRID interactions for C.elegans (Caenorhabditis elegans), entrez ids are used as identifiers
C.ElegansBioGRIDInteractionOfficial BioGRID interactions for C.elegans (Caenorhabditis elegans), official names are used as identifiers
C.ElegansBioGRIDInteractionUniqueId BioGRID interactions for C.elegans (Caenorhabditis elegans), unique ids are used as identifiers
findInteractionList Find BioGRID interaction list for a given organism an identifier type
FruitFlyBioGRIDInteractionEntrezId BioGRID interactions for Fruit fly (Drosophila melanogaster), entrez ids are used as identifiers
FruitFlyBioGRIDInteractionOfficial BioGRID interactions for Fruit fly (Drosophila melanogaster), official names are used as identifiers
FruitFlyBioGRIDInteractionUniqueId BioGRID interactions for Fruit fly (Drosophila melanogaster), unique ids (systematic names) are used as identifiers
HumanBioGRIDInteractionEntrezId BioGRID interactions for human (Homo sapiens), entrez ids are used as identifiers
HumanBioGRIDInteractionOfficial BioGRID interactions for human (Homo sapiens), official names are used as identifiers
HumanBioGRIDInteractionUniqueId BioGRID interactions for human (Homo sapiens), unique ids (systematic names) are used as identifiers
MouseBioGRIDInteractionEntrezId BioGRID interactions for Mouse (Mus musculus), entrez ids are used as identifiers
MouseBioGRIDInteractionOfficial BioGRID interactions for Mouse (Mus musculus), official names ids are used as identifiers
MouseBioGRIDInteractionUniqueId BioGRID interactions for Mouse (Mus musculus), unique ids (systematic names) are used as identifiers
S.PombeBioGRIDInteractionEntrezId BioGRID interactions for fission yeast (Schizosaccharomyces pombe), entrez ids are used as identifiers
S.PombeBioGRIDInteractionOfficial BioGRID interactions for fission yeast (Schizosaccharomyces pombe), official names are used as identifiers
S.PombeBioGRIDInteractionUniqueId BioGRID interactions for fission yeast (Schizosaccharomyces pombe), unique ids (systematic names) are used as identifiers
simpIntLists The package contains BioGRID interactions for various organisms in a simplified format
YeastBioGRIDInteractionEntrezId BioGRID interactions for budding yeast (Saccharomyces cerevisiae), entrez ids are used as identifiers
YeastBioGRIDInteractionOfficial BioGRID interactions for budding yeast (Saccharomyces cerevisiae), official names are used as identifiers
YeastBioGRIDInteractionUniqueId BioGRID interactions for budding yeast (Saccharomyces cerevisiae), unique ids (systematic names) are used as identifiers